Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Psta_2016PFAM: Thioredoxin domain; KEGG: Os07g0190800; hypothetical protein; K03671 thioredoxin 1. (573 aa)    
Predicted Functional Partners:
Psta_1278
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.800
Psta_1253
KEGG: afw:Anae109_3313 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: cyclic nucleotide-binding.
  
 
 0.678
Psta_2388
KEGG: ank:AnaeK_0667 hypothetical protein.
  
     0.654
Psta_1806
PFAM: PAAR repeat-containing protein; KEGG: sus:Acid_1613 PaaR repeat-containing protein.
    
   0.601
Psta_3153
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bba:Bd0373 hypothetical protein.
  
 
 0.595
Psta_4063
KEGG: xau:Xaut_3968 putative secreted protein.
  
 
 0.595
Psta_4225
PFAM: Colicin V production protein; KEGG: colicin V production protein.
 
     0.567
Psta_2387
Hypothetical protein; KEGG: trans-sialidase.
  
     0.549
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.546
groL-2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.546
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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