STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2016PFAM: Thioredoxin domain; KEGG: Os07g0190800; hypothetical protein; K03671 thioredoxin 1. (573 aa)    
Predicted Functional Partners:
Psta_1253
KEGG: afw:Anae109_3313 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: cyclic nucleotide-binding.
  
 
 0.659
Psta_2388
KEGG: ank:AnaeK_0667 hypothetical protein.
  
     0.654
Psta_4225
PFAM: Colicin V production protein; KEGG: colicin V production protein.
 
     0.565
Psta_0199
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: rma:Rmag_1018 glutamate synthase (ferredoxin).
   
 
 0.559
Psta_3153
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bba:Bd0373 hypothetical protein.
  
 
 0.559
Psta_4063
KEGG: xau:Xaut_3968 putative secreted protein.
  
 
 0.559
Psta_2387
Hypothetical protein; KEGG: trans-sialidase.
  
     0.549
Psta_3755
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5039 hypothetical protein.
  
     0.536
Psta_2017
Hypothetical protein.
       0.526
Psta_0787
KEGG: pst:PSPTO_1141 hypothetical protein.
  
     0.508
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.