Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_2129PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: scl:sce5905 methanol dehydrogenase regulator (MoxR)-like protein. (343 aa)    
Predicted Functional Partners:
Psta_2130
PFAM: protein of unknown function DUF58; KEGG: scl:sce5904 hypothetical protein.
 
    0.864
Psta_2131
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: scl:sce5903 hypothetical protein.
 
    0.756
Psta_2128
PFAM: von Willebrand factor type A; KEGG: scl:sce0468 hypothetical protein.
 
     0.741
Psta_2915
PFAM: protein of unknown function DUF58; KEGG: ank:AnaeK_4401 protein of unknown function DUF58.
  
    0.542
Psta_3223
PFAM: protein of unknown function DUF58; KEGG: afw:Anae109_4421 hypothetical protein.
  
    0.530
Psta_2700
PFAM: protein of unknown function DUF58; KEGG: mxa:MXAN_6611 hypothetical protein.
  
    0.524
Psta_2319
KEGG: afw:Anae109_4421 hypothetical protein.
  
    0.512
Psta_1558
SMART: von Willebrand factor type A; KEGG: afw:Anae109_4421 hypothetical protein.
  
    0.501
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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