Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_2134PFAM: Mammalian cell entry related domain protein; KEGG: gbm:Gbem_2733 mammalian cell entry related domain protein. (396 aa)    
Predicted Functional Partners:
Psta_2136
PFAM: protein of unknown function DUF140; KEGG: sat:SYN_00411 ABC-type transport system involved in resistance to organic solvents, permease component; Belongs to the MlaE permease family.
 
 0.996
Psta_2135
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
 
 0.994
Psta_0054
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pca:Pcar_1874 anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.739
Psta_0469
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvl:Dvul_2983 anti-sigma-factor antagonist.
  
 
 0.739
Psta_3468
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dde:Dde_1719 anti-anti-sigma regulatory factor, SpoIIAA.
  
 
 0.739
Psta_3637
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dal:Dalk_0884 anti-sigma-factor antagonist.
  
 
 0.739
Psta_4351
PFAM: OmpA/MotB domain protein; KEGG: maq:Maqu_0313 flagellar motor protein MotB.
   
   0.645
Psta_4507
PFAM: OmpA/MotB domain protein; KEGG: ilo:IL1565 outer membrane protein and related peptidoglycan-associated (LipO)proteins.
   
   0.645
Psta_2664
PFAM: surface antigen variable number repeat protein; KEGG: gbm:Gbem_0839 outer membrane protein assembly complex, YaeT protein.
 
    0.501
Psta_0354
PFAM: permease YjgP/YjgQ family protein; KEGG: glo:Glov_2589 permease YjgP/YjgQ family protein.
  
   
 0.487
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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