STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2165Chromosome segregation ATPase-like protein; KEGG: hypothetical protein. (1130 aa)    
Predicted Functional Partners:
Psta_0934
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.809
Psta_0659
Hypothetical protein; KEGG: myosin heavy chain.
  
     0.748
Psta_3611
KEGG: hypothetical protein.
  
     0.739
Psta_2654
SMART: von Willebrand factor type A; KEGG: Os04g0438100; hypothetical protein.
  
     0.689
Psta_4036
Hypothetical protein; KEGG: HYR10; hyphally-regulated cell wall protein.
  
     0.669
Psta_3853
PFAM: NolW domain protein; KEGG: hypothetical protein.
  
     0.640
Psta_1964
PFAM: YTV domain protein; KEGG: hypothetical protein LOC680468.
 
     0.638
Psta_2713
PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_pTi_257 agrocinopine utilization periplasmic binding protein AccA precursor.
 
     0.607
Psta_3038
KEGG: sus:Acid_4050 peptidase-like protein.
  
     0.593
Psta_4225
PFAM: Colicin V production protein; KEGG: colicin V production protein.
 
     0.584
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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