STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2307SMART: Parallel beta-helix repeat; KEGG: rru:Rru_A1485 parallel beta-helix repeat- containing protein. (520 aa)    
Predicted Functional Partners:
Psta_1281
KEGG: pzu:PHZ_c2448 hypothetical protein.
 
   
 0.824
Psta_1430
PFAM: FG-GAP repeat protein; KEGG: dol:Dole_1756 FG-GAP repeat-containing protein.
  
 
 0.807
Psta_2515
PFAM: lipolytic protein G-D-S-L family; KEGG: predicted protein.
 
   0.795
Psta_0348
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.772
Psta_4234
KEGG: sus:Acid_6537 hypothetical protein.
  
     0.769
Psta_2878
KEGG: sus:Acid_6537 hypothetical protein.
 
     0.764
Psta_1598
KEGG: sus:Acid_2075 hypothetical protein.
  
     0.758
Psta_1618
Hypothetical protein; KEGG: scl:sce2260 putative secreted protein.
  
     0.748
Psta_0347
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_5708 hypothetical protein.
  
     0.746
Psta_4378
Hypothetical protein; KEGG: ppu:PP_1581 BNR domain-containing protein.
  
     0.744
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.