STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2323PFAM: protein of unknown function DUF1355; KEGG: sus:Acid_6438 hypothetical protein. (821 aa)    
Predicted Functional Partners:
Psta_2324
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: mxa:MXAN_6612 hypothetical protein.
 
     0.952
Psta_2321
DNA repair ATPase-like protein; KEGG: hypothetical protein.
 
     0.950
Psta_2322
Hypothetical protein.
       0.798
Psta_2319
KEGG: afw:Anae109_4421 hypothetical protein.
 
     0.781
Psta_3793
PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: maq:Maqu_3387 peptidase S1 and S6, chymotrypsin/Hap.
  
     0.757
Psta_2914
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: mxa:MXAN_6612 hypothetical protein.
 
     0.752
Psta_3224
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: ade:Adeh_4265 double-transmembrane region.
  
     0.748
Psta_2910
Hypothetical protein; KEGG: cti:RALTA_B1983 squalene hopene cyclase.
  
     0.743
Psta_3466
Hypothetical protein; KEGG: predicted gene, 100041170.
  
     0.722
Psta_0478
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: acp:A2cp1_4421 hypothetical protein.
  
     0.692
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.