Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_2350Esterase; KEGG: scl:sce5734 esterases. (400 aa)    
Predicted Functional Partners:
Psta_0498
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: sus:Acid_3123 putative heme-binding protein.
 
     0.906
Psta_1455
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: gsu:GSU0193 L-sorbosone dehydrogenase, putative.
 
     0.890
Psta_1994
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: azo:azo2148 putative L-sorbosone dehydrogenase.
 
     0.829
Psta_2211
Hypothetical protein; KEGG: sus:Acid_0089 GDSL family lipase.
  
 
   0.771
Psta_3179
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_3745 hypothetical protein.
  
     0.769
Psta_1928
TIGRFAM: heme-binding protein; PFAM: alpha-L-rhamnosidase domain protein; KEGG: bba:Bd0989 L-sorbosone dehydrogenase.
  
     0.768
Psta_3475
TIGRFAM: heme-binding protein; KEGG: aba:Acid345_0291 cytochrome c, class I.
  
     0.767
Psta_0703
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rde:RD1_3874 hypothetical protein.
  
     0.765
Psta_3178
PFAM: protein of unknown function DUF1549; alpha-L- rhamnosidase domain protein; KEGG: sus:Acid_3744 hypothetical protein.
  
     0.763
Psta_2567
KEGG: sus:Acid_1705 signal peptide and transmembrane prediction.
  
     0.760
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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