STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2369Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (1003 aa)    
Predicted Functional Partners:
Psta_2374
KEGG: acp:A2cp1_2616 flagellar protein FliS like protein.
 
 
 0.990
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dal:Dalk_0987 flagellar hook-associated protein FlgK.
 
  
 0.978
fliW
Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.962
Psta_3776
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: cff:CFF8240_1512 flagellar motor switch protein FliM.
 
  
 0.955
Psta_4338
TIGRFAM: flagellar basal-body rod protein FlgC; KEGG: csa:Csal_1977 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.940
Psta_4340
Flagellar biosynthesis/type III secretory pathway lipoprotein-like protein; KEGG: acp:A2cp1_2559 flagellar M-ring protein FliF.
 
  
 0.929
Psta_4348
PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cja:CJA_1928 flagellar hook protein FlgE.
 
 
 0.923
Psta_2237
PFAM: surface presentation of antigens (SPOA) protein; KEGG: rso:RSp0377 flagellar motor switch protein FliN.
 
 
 0.920
Psta_4269
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G.
 
  
 0.917
Psta_4350
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA.
 
  
 0.915
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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