Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2389PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_0670 ABC transporter related. (308 aa)    
Predicted Functional Partners:
Psta_2388
KEGG: ank:AnaeK_0667 hypothetical protein.
 
   0.787
Psta_3204
KEGG: ank:AnaeK_0667 hypothetical protein.
  
   0.678
Psta_2387
Hypothetical protein; KEGG: trans-sialidase.
 
    0.630
Psta_1768
KEGG: hch:HCH_04665 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.532
Psta_4540
Hypothetical protein; KEGG: bcz:BCZK3299 ABC transporter, permease.
  
 
 0.511
Psta_2923
PFAM: ABC-2 type transporter; KEGG: aba:Acid345_2221 ABC multidrug efflux pump, inner membrane subunit.
  
  
 0.485
Psta_2386
PFAM: periplasmic binding protein; KEGG: sus:Acid_0126 hypothetical protein.
       0.480
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.476
Psta_3610
TIGRFAM: type IV pilus assembly protein PilM; KEGG: mxa:MXAN_5776 type IV pilus biogenesis protein PilM.
  
     0.453
Psta_4733
PFAM: protein of unknown function DUF214; KEGG: rsq:Rsph17025_3866 TRAP-type C4-dicarboxylate transport system periplasmic component-like protein.
 
      0.453
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.