Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_2500PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: aba:Acid345_1455 serine/threonine protein kinase. (680 aa)    
Predicted Functional Partners:
Psta_1567
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: afw:Anae109_0777 protein phosphatase 2C-like protein.
  
   0.818
Psta_2501
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_2693 sigma-24, ECF subfamily.
   
   0.778
Psta_0486
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: cja:CJA_1645 serine/threonine protein kinase PpkA.
  
     0.775
Psta_2499
KEGG: dentin sialophosphoprotein precursor.
       0.773
Psta_3291
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_1361 FHA domain protein.
  
 
   0.522
Psta_0483
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_2001 FHA domain protein.
  
 
   0.453
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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