STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2634PFAM: dihydropteroate synthase DHPS; KEGG: bph:Bphy_6492 dihydropteroate synthase DhpS. (487 aa)    
Predicted Functional Partners:
Psta_2631
PFAM: protein of unknown function DUF447; KEGG: gbe:GbCGDNIH1_0766 hypothetical protein.
 
     0.887
Psta_2630
PFAM: GHMP kinase domain protein; GHMP kinase; KEGG: mfa:Mfla_1661 beta-ribofuranosylaminobenzene 5'-phosphate synthase.
 
     0.864
Psta_2633
PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: msl:Msil_2398 para-aminobenzoate synthase, subunit I.
  
  
 0.848
Psta_2023
2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; KEGG: gme:Gmet_0495 7,8-dihydro-6- hydroxymethylpterin-pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK.
  
  
 0.832
folE
KEGG: bsu:BSU22780 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I.
  
  
 0.832
Psta_3593
PFAM: aspartate/glutamate/uridylate kinase; KEGG: mrd:Mrad2831_2724 aspartate/glutamate/uridylate kinase.
 
   
 0.805
Psta_3306
KEGG: bph:Bphy_5939 hypothetical protein.
 
   
 0.804
Psta_0063
TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: noc:Noc_0024 DNA/RNA non-specific endonuclease.
 
     0.789
Psta_1617
Formylmethanofuran dehydrogenase subunit B-like protein; KEGG: noc:Noc_0025 formylmethanofuran dehydrogenase.
 
   
 0.789
Psta_3592
TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: met:M446_5788 H4MPT-linked C1 transfer pathway protein.
  
   
 0.788
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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