STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2637TIGRFAM: heme-binding protein; membrane-bound dehydrogenase domain protein; KEGG: met:M446_1682 putative glucose/sorbosone dehydrogenase. (1107 aa)    
Predicted Functional Partners:
Psta_4626
Hypothetical protein; KEGG: lpn:lpg1028 chemiosmotic efflux system C protein B.
  
     0.740
Psta_3882
Hypothetical protein; KEGG: rme:Rmet_0747 putative membrane-bound dehydrogenase oxidoreductase protein.
  
     0.721
Psta_0929
Uncharacterized photosystem II stability/assembly factor-like protein; KEGG: mfa:Mfla_2258 hypothetical protein.
  
     0.705
Psta_2536
SMART: PA14 domain protein; KEGG: sus:Acid_4385 hypothetical protein.
  
     0.692
Psta_4505
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0440 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.687
Psta_2567
KEGG: sus:Acid_1705 signal peptide and transmembrane prediction.
  
     0.669
Psta_1643
Hypothetical protein; KEGG: bmj:BMULJ_04987 putative esterase.
  
     0.655
Psta_1408
Glucuronate isomerase-like protein; KEGG: hypothetical protein.
  
     0.628
Psta_0521
PFAM: von Willebrand factor type A; KEGG: sfu:Sfum_1496 hypothetical protein.
  
     0.608
Psta_3227
Hypothetical protein; KEGG: trans-sialidase.
  
     0.600
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.