STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2720KEGG: similar to KIAA1398 protein. (768 aa)    
Predicted Functional Partners:
Psta_2698
SMART: Pyrrolo-quinoline quinone; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein.
  
     0.705
Psta_4036
Hypothetical protein; KEGG: HYR10; hyphally-regulated cell wall protein.
  
     0.686
Psta_0529
Hypothetical protein; KEGG: bpt:Bpet0659 colicin exporter.
  
     0.624
Psta_1360
KEGG: hypothetical protein.
  
     0.608
Psta_3674
Hypothetical protein; KEGG: zgc:92533; K07604 type I keratin, acidic.
  
     0.599
Psta_3644
Hypothetical protein; KEGG: late embryogenesis abundant protein-related / LEA protein-related.
  
     0.593
Psta_3225
KEGG: sus:Acid_6438 hypothetical protein.
  
     0.579
Psta_2722
PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: slo:Shew_2289 glycosy hydrolase family protein.
 
     0.563
Psta_4287
KEGG: scl:sce7370 hypothetical protein.
  
     0.558
Psta_2467
Hypothetical protein; KEGG: ank:AnaeK_3798 FHA domain containing protein.
  
     0.552
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.