Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_2756PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_2223 ABC transporter related. (583 aa)    
Predicted Functional Partners:
Psta_2757
KEGG: mfa:Mfla_2222 secretion protein HlyD.
 
 0.977
Psta_2758
PFAM: outer membrane efflux protein; KEGG: nar:Saro_3787 outer membrane protein-like protein.
 
  
 0.949
Psta_3269
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gbm:Gbem_0845 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA.
 
 
  
0.708
Psta_3327
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2828 ABC transporter, ATPase subunit.
 
 
  
0.696
Psta_3757
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pca:Pcar_1259 ATP-binding transport protein; multicopy suppressor of HtrB.
 
 
  
0.693
Psta_2135
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
 
     
0.692
Psta_0206
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce0179 carbohydrate ABC transporter.
   
   0.649
Psta_0927
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce0180 carbohydrate ABC transporter.
   
   0.649
Psta_1054
PFAM: secretion protein HlyD family protein; KEGG: ilo:IL1684 membrane-fusion protein.
 
 
 0.648
Psta_3238
PFAM: sulphate transporter; KEGG: scl:sce4790 SulP family sulfate transporter.
  
     0.626
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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