STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2912KEGG: hypothetical protein. (1175 aa)    
Predicted Functional Partners:
Psta_2910
Hypothetical protein; KEGG: cti:RALTA_B1983 squalene hopene cyclase.
 
     0.891
Psta_2913
PFAM: protein of unknown function DUF1355; KEGG: sus:Acid_6438 hypothetical protein.
 
     0.865
Psta_2914
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: mxa:MXAN_6612 hypothetical protein.
 
     0.850
Psta_0934
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.809
Psta_2911
Hypothetical protein; KEGG: GA26025 gene product from transcript GA26025- RA.
       0.802
Psta_0403
Hypothetical protein; KEGG: shn:Shewana3_1693 putative signal peptide protein.
  
     0.742
Psta_2324
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: mxa:MXAN_6612 hypothetical protein.
  
     0.742
Psta_3224
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: ade:Adeh_4265 double-transmembrane region.
  
     0.742
Psta_0478
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: acp:A2cp1_4421 hypothetical protein.
  
     0.739
Psta_2915
PFAM: protein of unknown function DUF58; KEGG: ank:AnaeK_4401 protein of unknown function DUF58.
 
     0.719
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.