Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3095Hypothetical protein; KEGG: nmu:Nmul_A2303 peptidase S9, prolyl oligopeptidase active site region. (440 aa)    
Predicted Functional Partners:
Psta_1509
Esterase/lipase-like protein; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein.
 
     0.859
Psta_3096
PFAM: Acetyl xylan esterase; KEGG: sus:Acid_2990 acetyl xylan esterase.
 
     0.789
Psta_1430
PFAM: FG-GAP repeat protein; KEGG: dol:Dole_1756 FG-GAP repeat-containing protein.
  
     0.773
Psta_3531
PFAM: peptidase domain protein; KEGG: sus:Acid_3763 peptidase domain-containing protein.
  
     0.761
Psta_3304
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: glycoside hydrolase family 2 sugar binding; KEGG: mca:MCA3015 oxidoreductase, putative.
 
     0.749
Psta_0403
Hypothetical protein; KEGG: shn:Shewana3_1693 putative signal peptide protein.
 
     0.731
Psta_2091
PFAM: peptidase domain protein; KEGG: sus:Acid_5040 hypothetical protein.
  
     0.726
Psta_1618
Hypothetical protein; KEGG: scl:sce2260 putative secreted protein.
  
     0.711
Psta_0349
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_5708 hypothetical protein.
  
     0.688
Psta_1999
KEGG: mag:amb1862 hypothetical protein.
  
     0.688
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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