Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3183PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor. (237 aa)    
Predicted Functional Partners:
Psta_4677
PFAM: ABC-3 protein; iron dependent repressor; KEGG: bsu:BSU30740 manganese ABC transporter.
  
0.881
Psta_4675
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU30760 manganese ABC transporter ATP- binding protein.
 
  
 0.483
Psta_4674
PFAM: periplasmic solute binding protein; KEGG: bsu:BSU30770 manganese ABC transporter membrane protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.470
Psta_0014
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.424
Psta_1631
PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: dol:Dole_3066 hypothetical protein.
   
    0.422
Psta_2353
PFAM: domain of unknown function DUF1731; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_6672 hypothetical protein.
   
    0.422
Psta_4676
PFAM: ABC-3 protein; transport system permease protein; KEGG: rce:RC1_2461 zinc transport system membrane protein TroC.
 
  
 0.418
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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