STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_3225KEGG: sus:Acid_6438 hypothetical protein. (918 aa)    
Predicted Functional Partners:
Psta_3224
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: ade:Adeh_4265 double-transmembrane region.
 
     0.953
Psta_3223
PFAM: protein of unknown function DUF58; KEGG: afw:Anae109_4421 hypothetical protein.
 
     0.815
Psta_0478
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: acp:A2cp1_4421 hypothetical protein.
  
     0.772
Psta_2695
KEGG: sus:Acid_6432 hypothetical protein.
 
     0.772
Psta_2206
KEGG: hypothetical protein.
 
     0.769
Psta_2699
TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1550; KEGG: ank:AnaeK_4400 hypothetical protein.
  
     0.768
Psta_1360
KEGG: hypothetical protein.
  
     0.764
Psta_2884
Hypothetical protein; KEGG: proteophosphoglycan 5.
  
     0.761
Psta_2467
Hypothetical protein; KEGG: ank:AnaeK_3798 FHA domain containing protein.
  
     0.755
Psta_0136
Hypothetical protein; KEGG: pat:Patl_3492 twin-arginine translocation pathway signal.
 
     0.739
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.