Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Psta_3294PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0539 ABC transporter, ATPase subunit. (251 aa)    
Predicted Functional Partners:
Psta_3293
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_0184 glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component.
 0.999
Psta_4733
PFAM: protein of unknown function DUF214; KEGG: rsq:Rsph17025_3866 TRAP-type C4-dicarboxylate transport system periplasmic component-like protein.
 
      0.895
Psta_0609
TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2378 sulfate ABC transporter, permease protein CysW.
 
    
 0.875
Psta_3269
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gbm:Gbem_0845 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA.
 
    
0.874
Psta_4518
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.826
Psta_2859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK4244 oligopeptide ABC transporter, permease.
 
      0.733
Psta_0816
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_2089 ABC transporter related.
 
    
0.698
Psta_3295
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: noc:Noc_2382 phospholipid/glycerol acyltransferase.
       0.678
Psta_0610
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
 
      0.619
Psta_4091
KEGG: scl:sce4037 nitrate/nitrite ABC transporter substrate-binding protein.
    
 0.617
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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