Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3328PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_6186 hypothetical protein. (836 aa)    
Predicted Functional Partners:
Psta_3329
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_6548 hypothetical protein.
 
     0.922
Psta_3849
PFAM: Cytochrome b/b6 domain; KEGG: scl:sce0365 cytochrome b6.
  
 
 0.875
Psta_0183
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_4060 hypothetical protein.
  
     0.775
Psta_0232
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_6548 hypothetical protein.
  
     0.775
Psta_0319
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_4060 hypothetical protein.
  
     0.775
Psta_2202
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 hypothetical protein.
  
     0.775
Psta_2490
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 hypothetical protein.
  
     0.775
Psta_2729
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 hypothetical protein.
  
     0.775
Psta_2732
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_6548 hypothetical protein.
  
     0.775
Psta_3087
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_0975 hypothetical protein.
  
     0.775
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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