Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3335Exo-alpha-sialidase; PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: sus:Acid_0193 exo-alpha-sialidase. (659 aa)    
Predicted Functional Partners:
Psta_0894
PFAM: sulfatase; KEGG: swd:Swoo_3660 sulfatase.
  
 
  0.938
Psta_1293
PFAM: sulfatase; KEGG: sus:Acid_2580 sulfatase.
  
 
  0.936
Psta_3336
PFAM: dihydrodipicolinate synthetase; KEGG: yen:YE1188 N-acetylneuraminate lyase; Belongs to the DapA family.
 
   
 0.935
Psta_4638
Exo-alpha-sialidase; KEGG: sus:Acid_0193 exo-alpha-sialidase.
  
  
 
0.927
Psta_3681
PFAM: sulfatase; KEGG: hne:HNE_2178 sulfatase family protein.
  
 
  0.913
Psta_1820
PFAM: sulfatase; KEGG: vsp:VS_II0879 arylsulfatase.
    
  0.901
Psta_3724
PFAM: sulfatase; KEGG: swd:Swoo_3650 sulfatase.
    
  0.901
Psta_3963
Steryl-sulfatase; PFAM: sulfatase; KEGG: hne:HNE_2178 sulfatase family protein.
    
  0.901
Psta_1239
PFAM: N-acylglucosamine 2-epimerase; KEGG: renin binding protein; K01787 N- acylglucosamine 2-epimerase.
 
   
 0.780
Psta_1238
PFAM: Kelch repeat-containing protein; KEGG: set:SEN0991 exported protein.
 
     0.766
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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