STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_3418PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: dar:Daro_2024 peptidase S1C, Do. (552 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.986
Psta_1952
KEGG: sfu:Sfum_0343 DnaK-related protein.
  
 0.986
Psta_1953
KEGG: bte:BTH_II1320 putative DnaK-related protein (molecular chaperone); Belongs to the heat shock protein 70 family.
  
 0.986
Psta_2082
2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: bca:BCE_1142 DnaK protein, truncation.
  
 0.986
Psta_3824
PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; aminotransferase class I and II; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase.
  
 
 0.973
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
 
 0.939
Psta_4194
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.927
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.919
Psta_4444
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; KEGG: gbm:Gbem_2995 N-6 DNA methylase.
  
 
 0.918
rplQ
TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dvu:DVU1330 50S ribosomal protein L17.
  
   0.917
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.