Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3483Hypothetical protein. (917 aa)    
Predicted Functional Partners:
Psta_1448
PFAM: metallophosphoesterase; KEGG: scl:sce3464 putative phosphoesterase.
  
     0.767
Psta_0052
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein.
  
     0.739
Psta_3335
Exo-alpha-sialidase; PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: sus:Acid_0193 exo-alpha-sialidase.
  
     0.653
Psta_2405
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_2978 xylose isomerase domain- containing protein.
  
     0.590
Psta_3482
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5039 hypothetical protein.
 
     0.572
Psta_4623
KEGG: scl:sce5232 hypothetical protein.
  
     0.556
Psta_3484
KEGG: scl:sce0222 hypothetical protein.
       0.554
Psta_1182
PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3369 protein of unknown function DUF323.
  
     0.536
Psta_1511
KEGG: hypothetical protein.
  
     0.533
Psta_3476
PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: bcr:BCAH187_A3211 alpha-fucosidase.
 
     0.510
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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