Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Psta_3510Hypothetical protein. (58 aa)    
Predicted Functional Partners:
Psta_3511
Hypothetical protein.
       0.680
Psta_3509
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: gbm:Gbem_0114 heavy metal translocating P- type ATPase.
       0.677
Psta_3512
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sdn:Sden_1850 cytochrome c oxidase, cbb3- type, subunit II.
       0.669
Psta_3508
KEGG: afw:Anae109_1224 hypothetical protein.
       0.665
Psta_3507
KEGG: hypothetical protein.
       0.549
Psta_3514
Hypothetical protein; KEGG: sew:SeSA_A4418 D-xylose-proton symporter.
       0.515
Psta_3513
PFAM: cytochrome c oxidase subunit I; KEGG: sus:Acid_3507 cytochrome c oxidase, subunit I.
       0.508
Psta_3515
KEGG: aba:Acid345_0435 hypothetical protein.
       0.435
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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