STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_3512PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: sdn:Sden_1850 cytochrome c oxidase, cbb3- type, subunit II. (234 aa)    
Predicted Functional Partners:
Psta_3513
PFAM: cytochrome c oxidase subunit I; KEGG: sus:Acid_3507 cytochrome c oxidase, subunit I.
 0.999
Psta_2925
TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: sus:Acid_5593 caa(3)-type oxidase, subunit IV.
  
 0.997
Psta_3849
PFAM: Cytochrome b/b6 domain; KEGG: scl:sce0365 cytochrome b6.
  
 
 0.995
Psta_3515
KEGG: aba:Acid345_0435 hypothetical protein.
 
 0.968
Psta_2929
PFAM: cytochrome c oxidase subunit I; KEGG: sus:Acid_5590 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
    
 0.919
Psta_2930
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.918
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
 0.914
Psta_2926
PFAM: cytochrome c oxidase subunit III; KEGG: aba:Acid345_2994 cytochrome c oxidase, subunit III.
    
 0.910
Psta_3508
KEGG: afw:Anae109_1224 hypothetical protein.
 
     0.899
Psta_3511
Hypothetical protein.
       0.799
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.