Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Psta_3524KEGG: xca:xccb100_1158 exported endo-1,4-beta- xylanase. (301 aa)    
Predicted Functional Partners:
Psta_3824
PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; aminotransferase class I and II; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase.
  
 
 0.777
Psta_2754
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
  
     0.687
Psta_3486
Sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
  
     0.682
Psta_2974
PFAM: Alpha/beta hydrolase fold-3 domain protein; peptidase S15; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein.
  
     0.679
Psta_3244
Sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
  
     0.672
Psta_1322
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pst:PSPTO_4843 esterase/lipase/thioesterase family protein.
  
     0.665
Psta_4634
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sde:Sde_3157 esterase/lipase-like.
  
     0.647
Psta_0748
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bra:BRADO1504 putative para-nitrobenzyl esterase.
  
     0.612
Psta_0584
PFAM: putative esterase; KEGG: sus:Acid_2103 putative esterase.
 
     0.580
Psta_3523
TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bha:BH0283 hypothetical protein.
       0.505
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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