Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Psta_3558PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: pca:Pcar_1161 flagellar GTP-binding protein. (417 aa)    
Predicted Functional Partners:
Psta_3557
Chromosome partitioning ATPase-like protein; KEGG: maq:Maqu_1976 cobyrinic acid a,c-diamide synthase.
 
 0.998
Psta_3776
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: cff:CFF8240_1512 flagellar motor switch protein FliM.
 
 
 0.975
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.974
Psta_4269
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G.
 
 
 0.943
Psta_4341
PFAM: flagellar motor switch protein FliG; KEGG: FliG protein; K02410 flagellar motor switch protein FliG.
 
 
 0.936
Psta_4358
PFAM: type III secretion exporter; KEGG: spe:Spro_2977 flagellar biosynthesis protein FlhB.
 
  
 0.931
Psta_4342
PFAM: flagellar assembly protein FliH; KEGG: dal:Dalk_0669 flagellar assembly protein FliH.
 
  
 0.923
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE.
 
  
 0.921
Psta_4354
Hypothetical protein; KEGG: ppw:PputW619_3682 flagellar biosynthesis protein FliO.
  
  
 0.921
Psta_4340
Flagellar biosynthesis/type III secretory pathway lipoprotein-like protein; KEGG: acp:A2cp1_2559 flagellar M-ring protein FliF.
 
  
 0.920
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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