Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_3586PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_2363 hypothetical protein. (331 aa)    
Predicted Functional Partners:
Psta_3552
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_7187 TPR repeat-containing protein.
  
   0.753
Psta_3134
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_7187 TPR repeat-containing protein.
  
   0.746
Psta_3609
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_4728 TPR repeat protein.
  
     0.722
Psta_3109
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dal:Dalk_4366 sporulation domain protein.
 
     0.705
Psta_2210
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dal:Dalk_2207 tetratricopeptide TPR_2 repeat protein.
 
     0.638
Psta_4743
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: glo:Glov_3605 tetratricopeptide TPR_2 repeat protein.
 
     0.631
Psta_1803
PFAM: Methyltransferase type 12; Methyltransferase type 11; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: lch:Lcho_4081 methyltransferase type 12.
 
   0.627
Psta_3584
PFAM: type II and III secretion system protein; transport-associated; KEGG: sfu:Sfum_1493 type II and III secretion system protein; Belongs to the bacterial secretin family.
 
 
 0.620
Psta_0789
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dde:Dde_2336 TPR repeat-containing protein.
  
   0.605
Psta_3585
Hypothetical protein.
       0.598
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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