STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_3644Hypothetical protein; KEGG: late embryogenesis abundant protein-related / LEA protein-related. (445 aa)    
Predicted Functional Partners:
Psta_4036
Hypothetical protein; KEGG: HYR10; hyphally-regulated cell wall protein.
  
     0.773
Psta_2654
SMART: von Willebrand factor type A; KEGG: Os04g0438100; hypothetical protein.
  
     0.772
Psta_3611
KEGG: hypothetical protein.
  
     0.767
Psta_2387
Hypothetical protein; KEGG: trans-sialidase.
  
     0.762
Psta_2388
KEGG: ank:AnaeK_0667 hypothetical protein.
  
     0.747
Psta_3853
PFAM: NolW domain protein; KEGG: hypothetical protein.
  
     0.747
Psta_3227
Hypothetical protein; KEGG: trans-sialidase.
  
     0.744
Psta_1791
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: GG16353 gene product from transcript GG16353- RA.
  
    0.739
Psta_2206
KEGG: hypothetical protein.
  
     0.739
Psta_4401
KEGG: lch:Lcho_1986 hypothetical protein.
  
     0.731
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.