Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_4030PFAM: NIPSNAP family containing protein; KEGG: sus:Acid_3876 NIPSNAP family protein. (145 aa)    
Predicted Functional Partners:
Psta_2956
KEGG: sus:Acid_7742 hypothetical protein; TIGRFAM: membrane-bound dehydrogenase domain protein; PFAM: protein of unknown function DUF1080; Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module.
  
     0.706
Psta_0040
PFAM: FG-GAP repeat protein; KEGG: sus:Acid_2424 FG-GAP repeat-containing protein.
  
     0.692
Psta_2955
TIGRFAM: heme-binding protein; KEGG: sus:Acid_3123 putative heme-binding protein.
  
     0.671
Psta_1994
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: azo:azo2148 putative L-sorbosone dehydrogenase.
  
     0.639
Psta_3656
KEGG: sus:Acid_4767 hypothetical protein.
  
     0.608
Psta_1970
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: aba:Acid345_0291 cytochrome c, class I.
  
     0.601
Psta_3761
KEGG: sus:Acid_4741 hypothetical protein.
  
     0.585
Psta_2350
Esterase; KEGG: scl:sce5734 esterases.
  
     0.581
Psta_0498
TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; KEGG: sus:Acid_3123 putative heme-binding protein.
  
     0.576
Psta_1946
Heme-binding protein; KEGG: mxa:MXAN_4914 F5/8 type C domain protein; TIGRFAM: heme-binding protein; PFAM: coagulation factor 5/8 type domain protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein.
  
     0.549
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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