Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_4037KEGG: maq:Maqu_3028 hypothetical protein. (442 aa)    
Predicted Functional Partners:
Psta_4036
Hypothetical protein; KEGG: HYR10; hyphally-regulated cell wall protein.
 
     0.945
Psta_4035
Hypothetical protein; KEGG: acp:A2cp1_1579 response regulator receiver protein.
       0.804
Psta_2206
KEGG: hypothetical protein.
 
     0.755
Psta_0969
Hypothetical protein; KEGG: mxa:MXAN_0776 von Willebrand factor type A domain protein.
  
     0.725
Psta_3853
PFAM: NolW domain protein; KEGG: hypothetical protein.
  
     0.716
Psta_3043
KEGG: bja:blr0521 hypothetical protein.
 
 
 0.710
Psta_4505
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0440 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.704
Psta_2387
Hypothetical protein; KEGG: trans-sialidase.
 
 
 0.691
Psta_4187
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pat:Patl_4069 biopolymer transport protein ExbD/TolR.
  
   0.691
Psta_2467
Hypothetical protein; KEGG: ank:AnaeK_3798 FHA domain containing protein.
  
     0.687
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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