STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4048PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_1146 hypothetical protein. (484 aa)    
Predicted Functional Partners:
Psta_4049
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: pat:Patl_0815 hypothetical protein.
 
     0.952
Psta_0182
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_4059 hypothetical protein.
  
     0.775
Psta_0233
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_6186 hypothetical protein.
  
     0.775
Psta_1604
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5039 hypothetical protein.
  
     0.775
Psta_1655
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_3952 hypothetical protein.
  
     0.775
Psta_2228
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_0974 hypothetical protein.
  
     0.775
Psta_2491
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; PA14 domain protein; SMART: PA14 domain protein; KEGG: sus:Acid_3952 hypothetical protein.
  
     0.775
Psta_2730
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_1145 hypothetical protein.
  
     0.775
Psta_2733
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_6547 hypothetical protein.
  
     0.775
Psta_3088
PFAM: protein of unknown function DUF1549; Planctomycete cytochrome C; KEGG: sus:Acid_6547 hypothetical protein.
  
     0.775
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.