Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4064PFAM: Radical SAM domain protein; KEGG: maq:Maqu_0146 radical SAM domain-containing protein. (309 aa)    
Predicted Functional Partners:
Psta_3798
PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_1418 methyltransferase type 11.
     0.899
Psta_4065
PFAM: metallophosphoesterase; KEGG: acr:Acry_0194 radical SAM domain-containing protein.
     0.884
Psta_4063
KEGG: xau:Xaut_3968 putative secreted protein.
 
     0.780
Psta_4395
KEGG: gsu:GSU0485 hypothetical protein.
 
     0.709
Psta_3597
PFAM: glycosyl transferase family 2; KEGG: dol:Dole_1612 glycosyl transferase family protein.
  
     0.706
Psta_1577
PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_3002 SNARE associated Golgi protein.
 
   
 0.671
Psta_2934
SMART: PDZ/DHR/GLGF domain protein; KEGG: sus:Acid_4385 hypothetical protein.
  
     0.556
Psta_1037
PFAM: fatty acid hydroxylase; KEGG: eli:ELI_10990 sterol desaturase,-like protein.
 
     0.456
Psta_1109
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_0347 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
  
 0.450
Psta_4644
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: ppd:Ppro_3374 uroporphyrin-III C- methyltransferase.
 
  
 0.429
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.