STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4065PFAM: metallophosphoesterase; KEGG: acr:Acry_0194 radical SAM domain-containing protein. (271 aa)    
Predicted Functional Partners:
Psta_4064
PFAM: Radical SAM domain protein; KEGG: maq:Maqu_0146 radical SAM domain-containing protein.
     0.886
Psta_4063
KEGG: xau:Xaut_3968 putative secreted protein.
 
    0.786
Psta_2831
PFAM: metallophosphoesterase; KEGG: afw:Anae109_2178 metallophosphoesterase.
  
     0.775
Psta_2079
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.642
Psta_4066
Hypothetical protein; KEGG: GH24424 gene product from transcript GH24424- RA.
       0.413
Psta_4067
Hypothetical protein.
       0.413
Psta_1643
Hypothetical protein; KEGG: bmj:BMULJ_04987 putative esterase.
 
  
 0.401
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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