Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_4086PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: scl:sce8491 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (764 aa)    
Predicted Functional Partners:
Psta_4087
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce8492 putative anaerobic reductase component.
  
 0.995
Psta_4084
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; Fe-S cluster domain protein; KEGG: msl:Msil_1784 FAD-binding domain protein.
    
 0.981
Psta_4693
KEGG: aba:Acid345_0134 ferredoxin-like.
 
 
 0.935
Psta_4088
KEGG: scl:sce4034 nitrate/nitrite ABC transporter ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.927
Psta_0200
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: Os05g0555600; hypothetical protein; K00266 glutamate synthase (NADPH/NADH) small chain.
    
 0.925
Psta_0738
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sme:SMa1525 NuoF2 NADH I chain F.
  
 
 0.919
Psta_1619
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: sfu:Sfum_1398 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.916
Psta_0739
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: scl:sce4224 NADH dehydrogenase (ubiquinone).
  
 
 0.915
Psta_3002
4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
 
 0.899
Psta_1109
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_0347 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
 
 0.869
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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