Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_4192PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rme:Rmet_4377 phospholipid/glycerol acyltransferase. (413 aa)    
Predicted Functional Partners:
Psta_2061
PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein.
  
     0.757
Psta_2991
KEGG: hypothetical protein.
  
     0.741
Psta_2214
KEGG: sfu:Sfum_4007 hypothetical protein.
  
     0.731
Psta_2206
KEGG: hypothetical protein.
  
     0.730
Psta_3824
PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; aminotransferase class I and II; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase.
 
 
 0.729
Psta_2884
Hypothetical protein; KEGG: proteophosphoglycan 5.
  
     0.725
Psta_2270
ATP-dependent nuclease subunit B-like protein; KEGG: rpi:Rpic_1033 hypothetical protein.
 
     0.713
Psta_3611
KEGG: hypothetical protein.
  
     0.705
Psta_3569
KEGG: hypothetical protein.
  
     0.703
Psta_1396
PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dno:DNO_0576 hypothetical protein.
 
     0.695
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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