Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylAKEGG: bsu:BSU17600 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family. (437 aa)    
Predicted Functional Partners:
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_0804 xylulokinase.
 
 
 0.967
Psta_3461
PFAM: ROK family protein; KEGG: sde:Sde_2639 fructokinase.
    
 0.911
Psta_1374
PFAM: ROK family protein; KEGG: transcriptional regulator protein; K00845 glucokinase.
    
 0.823
Psta_3551
PFAM: ROK family protein; KEGG: sfu:Sfum_1953 ROK family protein.
    
 0.823
Psta_4719
PFAM: ROK family protein; KEGG: bcb:BCB4264_A4377 glucokinase.
    
 0.823
Psta_4261
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rpa:RPA1490 bacteriophytochrome PhyB.
       0.682
Psta_4263
KEGG: sus:Acid_4290 hypothetical protein.
       0.511
Psta_3061
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ses:SARI_03974 hypothetical protein.
 
   
 0.462
Psta_4260
KEGG: hypothetical protein.
       0.440
Psta_0940
PFAM: Mannitol dehydrogenase rossman domain; Mannitol dehydrogenase domain; KEGG: uxuB; D-mannonate oxidoreductase protein; K00041 tagaturonate reductase.
 
   
 0.416
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.