STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4304Proposed homoserine kinase; KEGG: pca:Pcar_1514 cofactor-independent phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: metalloenzyme domain protein. (403 aa)    
Predicted Functional Partners:
Psta_2908
Phosphoglycerate mutase; PFAM: metalloenzyme domain protein; KEGG: sat:SYN_02641 cofactor-independent phosphoglycerate mutase.
  
  
 
0.927
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.917
Psta_1901
Phosphoglycerate kinase; KEGG: hypothetical protein; K00927 phosphoglycerate kinase.
    
 0.915
Psta_0794
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: sus:Acid_0778 glycerate 2-kinase.
     
  0.900
Psta_0833
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rec:RHECIAT_CH0002310 putative phosphoglycerate dehydrogenase protein.
     
  0.900
Psta_4745
TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: sfu:Sfum_3649 D-3-phosphoglycerate dehydrogenase.
     
  0.900
Psta_2907
PFAM: phosphoglucose isomerase (PGI); KEGG: bsu:BSU31350 glucose-6-phosphate isomerase.
   
 
 0.827
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
     
 0.808
Psta_1600
TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: bxe:Bxe_B1309 transketolase; Belongs to the transketolase family.
    
  0.803
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
  0.800
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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