Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Psta_4350PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA. (259 aa)    
Predicted Functional Partners:
Psta_4351
PFAM: OmpA/MotB domain protein; KEGG: maq:Maqu_0313 flagellar motor protein MotB.
 
 0.999
Psta_4338
TIGRFAM: flagellar basal-body rod protein FlgC; KEGG: csa:Csal_1977 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.985
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.985
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dal:Dalk_0987 flagellar hook-associated protein FlgK.
 
  
 0.982
fliQ
Export protein FliQ family 3; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.982
Psta_4507
PFAM: OmpA/MotB domain protein; KEGG: ilo:IL1565 outer membrane protein and related peptidoglycan-associated (LipO)proteins.
 
 
 0.977
Psta_3776
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: cff:CFF8240_1512 flagellar motor switch protein FliM.
 
 
 0.975
Psta_4341
PFAM: flagellar motor switch protein FliG; KEGG: FliG protein; K02410 flagellar motor switch protein FliG.
 
  
 0.975
Psta_4353
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bvi:Bcep1808_0049 flagellar motor switch protein FliN.
 
  
 0.974
Psta_4269
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G.
 
  
 0.970
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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