STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4463Hypothetical protein; KEGG: scl:sce3803 putative ATP/GTP-binding protein. (1224 aa)    
Predicted Functional Partners:
Psta_4464
PFAM: Endonuclease I; KEGG: mxa:MXAN_2141 putative protease / nuclease, EndA/NucM family.
       0.773
Psta_4462
PFAM: lipase class 3; KEGG: ppr:PBPRA1385 hypothetical protein.
 
     0.745
Psta_1074
SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.654
Psta_1157
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.629
Psta_4461
PFAM: DNA/RNA non-specific endonuclease; peptidase S8 and S53 subtilisin kexin sedolisin; SMART: DNA/RNA non-specific endonuclease; KEGG: jan:Jann_3581 DNA/RNA non-specific endonuclease.
 
     0.615
Psta_2062
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: scl:sce2686 WD repeat-containing protein.
  
     0.613
Psta_3242
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.611
Psta_3480
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.597
Psta_4428
KEGG: bcb:BCB4264_A3230 hypothetical cytosolic protein.
  
     0.592
Psta_1602
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
     0.590
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.