STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4756Hypothetical protein. (235 aa)    
Predicted Functional Partners:
Psta_2467
Hypothetical protein; KEGG: ank:AnaeK_3798 FHA domain containing protein.
  
     0.624
Psta_3997
PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: scl:sce8271 hypothetical protein.
  
     0.602
Psta_1360
KEGG: hypothetical protein.
  
     0.593
Psta_4287
KEGG: scl:sce7370 hypothetical protein.
  
     0.519
Psta_2464
SMART: Tetratricopeptide domain protein; KEGG: dde:Dde_1580 TPR domain-containing protein.
  
     0.515
Psta_2458
KEGG: smt:Smal_3698 hypothetical protein.
  
     0.497
Psta_4148
PFAM: ubiquitin-conjugating protein E2; KEGG: hypothetical protein; K10576 ubiquitin- conjugating enzyme E2 H.
  
     0.489
Psta_3197
PFAM: protein of unknown function DUF309; KEGG: sil:SPO3699 hypothetical protein.
  
     0.474
Psta_4145
PFAM: Mov34/MPN/PAD-1 family protein; KEGG: ABL146Cp; K09613 COP9 signalosome complex subunit 5.
  
     0.473
Psta_2185
PFAM: GAF domain protein; KEGG: dol:Dole_0618 putative phytochrome sensor protein.
  
     0.471
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.