STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_4759PFAM: protein of unknown function DUF1295; KEGG: smt:Smal_1952 protein of unknown function DUF1295. (266 aa)    
Predicted Functional Partners:
Psta_4758
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; putative methyltransferase; KEGG: gsu:GSU2318 cyclopropane-fatty-acyl- phospholipid synthase, putative.
     0.983
Psta_1630
PFAM: amine oxidase; KEGG: ppd:Ppro_0129 hypothetical protein.
    0.946
Psta_1628
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: asa:ASA_3225 cyclopropane-fatty-acyl- phospholipid synthase.
     0.793
Psta_1629
PFAM: protein of unknown function DUF1365; KEGG: ppd:Ppro_0128 hypothetical protein.
 
     0.779
Psta_4760
PFAM: glycosyl transferase family 9; KEGG: pca:Pcar_1263 ADP-heptose--LPS heptosyltransferase II.
       0.421
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.