Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC00139.1 | SDC29614.1 | SAMN05421630_1017 | SAMN05421630_1011187 | CBS domain-containing protein. | Hypothetical protein. | 0.599 |
SDC00139.1 | SDC99456.1 | SAMN05421630_1017 | SAMN05421630_10591 | CBS domain-containing protein. | MFS transporter, NNP family, nitrate/nitrite transporter. | 0.693 |
SDC00139.1 | SDD07240.1 | SAMN05421630_1017 | SAMN05421630_105441 | CBS domain-containing protein. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.605 |
SDC00139.1 | SDD57976.1 | SAMN05421630_1017 | SAMN05421630_11048 | CBS domain-containing protein. | Pyridoxamine 5'-phosphate oxidase. | 0.422 |
SDC00139.1 | SDD58126.1 | SAMN05421630_1017 | SAMN05421630_11055 | CBS domain-containing protein. | Nitroreductase family protein. | 0.638 |
SDC23199.1 | SDC29614.1 | SAMN05421630_101908 | SAMN05421630_1011187 | Erythromycin esterase. | Hypothetical protein. | 0.548 |
SDC29547.1 | SDC29566.1 | SAMN05421630_1011184 | SAMN05421630_1011185 | Sigma 54 modulation/S30EA ribosomal protein C terminus. | Predicted phosphoribosyltransferase. | 0.623 |
SDC29547.1 | SDC29590.1 | SAMN05421630_1011184 | SAMN05421630_1011186 | Sigma 54 modulation/S30EA ribosomal protein C terminus. | Nucleotide-binding universal stress protein, UspA family. | 0.620 |
SDC29547.1 | SDC29614.1 | SAMN05421630_1011184 | SAMN05421630_1011187 | Sigma 54 modulation/S30EA ribosomal protein C terminus. | Hypothetical protein. | 0.587 |
SDC29566.1 | SDC29547.1 | SAMN05421630_1011185 | SAMN05421630_1011184 | Predicted phosphoribosyltransferase. | Sigma 54 modulation/S30EA ribosomal protein C terminus. | 0.623 |
SDC29566.1 | SDC29590.1 | SAMN05421630_1011185 | SAMN05421630_1011186 | Predicted phosphoribosyltransferase. | Nucleotide-binding universal stress protein, UspA family. | 0.548 |
SDC29566.1 | SDC29614.1 | SAMN05421630_1011185 | SAMN05421630_1011187 | Predicted phosphoribosyltransferase. | Hypothetical protein. | 0.600 |
SDC29566.1 | SDD07240.1 | SAMN05421630_1011185 | SAMN05421630_105441 | Predicted phosphoribosyltransferase. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.473 |
SDC29590.1 | SDC29547.1 | SAMN05421630_1011186 | SAMN05421630_1011184 | Nucleotide-binding universal stress protein, UspA family. | Sigma 54 modulation/S30EA ribosomal protein C terminus. | 0.620 |
SDC29590.1 | SDC29566.1 | SAMN05421630_1011186 | SAMN05421630_1011185 | Nucleotide-binding universal stress protein, UspA family. | Predicted phosphoribosyltransferase. | 0.548 |
SDC29590.1 | SDC29614.1 | SAMN05421630_1011186 | SAMN05421630_1011187 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.669 |
SDC29614.1 | SDC00139.1 | SAMN05421630_1011187 | SAMN05421630_1017 | Hypothetical protein. | CBS domain-containing protein. | 0.599 |
SDC29614.1 | SDC23199.1 | SAMN05421630_1011187 | SAMN05421630_101908 | Hypothetical protein. | Erythromycin esterase. | 0.548 |
SDC29614.1 | SDC29547.1 | SAMN05421630_1011187 | SAMN05421630_1011184 | Hypothetical protein. | Sigma 54 modulation/S30EA ribosomal protein C terminus. | 0.587 |
SDC29614.1 | SDC29566.1 | SAMN05421630_1011187 | SAMN05421630_1011185 | Hypothetical protein. | Predicted phosphoribosyltransferase. | 0.600 |
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