STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC30968.1Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. (135 aa)    
Predicted Functional Partners:
SDC30945.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.636
SDC54146.1
Hypothetical protein.
  
    0.593
SDD47720.1
Protein of unknown function.
   
    0.540
SDC30918.1
Helix-turn-helix domain-containing protein.
       0.507
SDC98664.1
PhnB protein.
 
  
0.466
SDC28137.1
Putative NADH-flavin reductase.
   
    0.465
SDC18998.1
NAD(P)H-binding.
   
    0.465
SDC64064.1
NAD(P)H-binding.
   
    0.465
SDD75640.1
Carboxymethylenebutenolidase/hypothetical protein.
   
    0.465
SDC19423.1
isopenicillin-N N-acyltransferase like protein.
  
    0.456
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.