Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC00768.1 | SDC00794.1 | SAMN05421630_10135 | SAMN05421630_10136 | DNA-binding transcriptional regulator, FrmR family. | Copper chaperone CopZ. | 0.863 |
SDC00768.1 | SDC00815.1 | SAMN05421630_10135 | SAMN05421630_10137 | DNA-binding transcriptional regulator, FrmR family. | Hypothetical protein. | 0.514 |
SDC00768.1 | SDC00835.1 | SAMN05421630_10135 | SAMN05421630_10138 | DNA-binding transcriptional regulator, FrmR family. | Cu+-exporting ATPase. | 0.652 |
SDC00768.1 | SDC22508.1 | SAMN05421630_10135 | SAMN05421630_101880 | DNA-binding transcriptional regulator, FrmR family. | Cation-transporting ATPase G. | 0.518 |
SDC00768.1 | SDC26051.1 | SAMN05421630_10135 | SAMN05421630_1011027 | DNA-binding transcriptional regulator, FrmR family. | Cu+-exporting ATPase. | 0.480 |
SDC00768.1 | SDD86135.1 | SAMN05421630_10135 | SAMN05421630_113169 | DNA-binding transcriptional regulator, FrmR family. | Cu2+-exporting ATPase. | 0.477 |
SDC00794.1 | SDC00768.1 | SAMN05421630_10136 | SAMN05421630_10135 | Copper chaperone CopZ. | DNA-binding transcriptional regulator, FrmR family. | 0.863 |
SDC00794.1 | SDC00815.1 | SAMN05421630_10136 | SAMN05421630_10137 | Copper chaperone CopZ. | Hypothetical protein. | 0.774 |
SDC00794.1 | SDC00835.1 | SAMN05421630_10136 | SAMN05421630_10138 | Copper chaperone CopZ. | Cu+-exporting ATPase. | 0.948 |
SDC00794.1 | SDC22508.1 | SAMN05421630_10136 | SAMN05421630_101880 | Copper chaperone CopZ. | Cation-transporting ATPase G. | 0.885 |
SDC00794.1 | SDC23784.1 | SAMN05421630_10136 | SAMN05421630_101930 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.610 |
SDC00794.1 | SDC24556.1 | SAMN05421630_10136 | SAMN05421630_101962 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.610 |
SDC00794.1 | SDC26051.1 | SAMN05421630_10136 | SAMN05421630_1011027 | Copper chaperone CopZ. | Cu+-exporting ATPase. | 0.905 |
SDC00794.1 | SDD13704.1 | SAMN05421630_10136 | SAMN05421630_10680 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.610 |
SDC00794.1 | SDD14859.1 | SAMN05421630_10136 | SAMN05421630_106131 | Copper chaperone CopZ. | Superoxide dismutase, Cu-Zn family. | 0.992 |
SDC00794.1 | SDD86135.1 | SAMN05421630_10136 | SAMN05421630_113169 | Copper chaperone CopZ. | Cu2+-exporting ATPase. | 0.888 |
SDC00815.1 | SDC00768.1 | SAMN05421630_10137 | SAMN05421630_10135 | Hypothetical protein. | DNA-binding transcriptional regulator, FrmR family. | 0.514 |
SDC00815.1 | SDC00794.1 | SAMN05421630_10137 | SAMN05421630_10136 | Hypothetical protein. | Copper chaperone CopZ. | 0.774 |
SDC00815.1 | SDC00835.1 | SAMN05421630_10137 | SAMN05421630_10138 | Hypothetical protein. | Cu+-exporting ATPase. | 0.882 |
SDC00835.1 | SDC00768.1 | SAMN05421630_10138 | SAMN05421630_10135 | Cu+-exporting ATPase. | DNA-binding transcriptional regulator, FrmR family. | 0.652 |
page 1 of 2