Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC11338.1 | SDC11370.1 | SAMN05421630_101464 | SAMN05421630_101465 | Putative adhesin. | HicB family protein. | 0.968 |
SDC11338.1 | SDC11422.1 | SAMN05421630_101464 | SAMN05421630_101467 | Putative adhesin. | Hypothetical protein. | 0.576 |
SDC11338.1 | SDC11448.1 | SAMN05421630_101464 | SAMN05421630_101468 | Putative adhesin. | Serine/threonine protein kinase. | 0.404 |
SDC11338.1 | thyX | SAMN05421630_101464 | SAMN05421630_101466 | Putative adhesin. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.673 |
SDC11370.1 | SDC11338.1 | SAMN05421630_101465 | SAMN05421630_101464 | HicB family protein. | Putative adhesin. | 0.968 |
SDC11370.1 | SDC11422.1 | SAMN05421630_101465 | SAMN05421630_101467 | HicB family protein. | Hypothetical protein. | 0.579 |
SDC11370.1 | SDC11448.1 | SAMN05421630_101465 | SAMN05421630_101468 | HicB family protein. | Serine/threonine protein kinase. | 0.404 |
SDC11370.1 | thyX | SAMN05421630_101465 | SAMN05421630_101466 | HicB family protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.645 |
SDC11422.1 | SDC11338.1 | SAMN05421630_101467 | SAMN05421630_101464 | Hypothetical protein. | Putative adhesin. | 0.576 |
SDC11422.1 | SDC11370.1 | SAMN05421630_101467 | SAMN05421630_101465 | Hypothetical protein. | HicB family protein. | 0.579 |
SDC11422.1 | SDC11448.1 | SAMN05421630_101467 | SAMN05421630_101468 | Hypothetical protein. | Serine/threonine protein kinase. | 0.593 |
SDC11422.1 | SDC11476.1 | SAMN05421630_101467 | SAMN05421630_101469 | Hypothetical protein. | Serine/threonine protein kinase. | 0.453 |
SDC11422.1 | argD | SAMN05421630_101467 | SAMN05421630_112231 | Hypothetical protein. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.410 |
SDC11422.1 | pheT | SAMN05421630_101467 | SAMN05421630_112226 | Hypothetical protein. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.461 |
SDC11422.1 | thyX | SAMN05421630_101467 | SAMN05421630_101466 | Hypothetical protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.836 |
SDC11448.1 | SDC11338.1 | SAMN05421630_101468 | SAMN05421630_101464 | Serine/threonine protein kinase. | Putative adhesin. | 0.404 |
SDC11448.1 | SDC11370.1 | SAMN05421630_101468 | SAMN05421630_101465 | Serine/threonine protein kinase. | HicB family protein. | 0.404 |
SDC11448.1 | SDC11422.1 | SAMN05421630_101468 | SAMN05421630_101467 | Serine/threonine protein kinase. | Hypothetical protein. | 0.593 |
SDC11448.1 | SDC11476.1 | SAMN05421630_101468 | SAMN05421630_101469 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.580 |
SDC11448.1 | thyX | SAMN05421630_101468 | SAMN05421630_101466 | Serine/threonine protein kinase. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.578 |
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