STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC16658.1P-cumate 2,3-dioxygenase alpha subunit. (440 aa)    
Predicted Functional Partners:
SDC16681.1
P-cumate 2,3-dioxygenase beta subunit.
 
 0.998
SDD84713.1
P-cumate 2,3-dioxygenase beta subunit.
 
 0.992
SDC16745.1
2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase.
 
  
 0.980
SDC22675.1
Phthalate 3,4-dioxygenase beta subunit.
 
 
 0.910
SDD84580.1
Benzoate/toluate 1,2-dioxygenase alpha subunit.
  
  
 
0.907
SDC30500.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
 
 0.903
SDC16732.1
2-hydroxy-6-oxonona-2,4-dienedioate hydrolase.
 
 
 
 0.845
SDC16780.1
Catechol-2,3-dioxygenase.
 
  
 0.845
SDC16704.1
NADPH:quinone reductase.
       0.773
SDC16890.1
Ferredoxin/2'-carboxy-2,3-dihydroxybiphenyl 1,2-dioxygenase small subunit and ferredoxin fusion protein.
 
   
 0.707
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.