STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC22624.12-formylbenzoate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa)    
Predicted Functional Partners:
SDE01510.1
Aldehyde dehydrogenase family protein.
    
0.887
SDC22608.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
 
 0.815
SDC22581.1
Hypothetical protein.
       0.780
SDC22739.1
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase.
  
 
 0.565
SDC22652.1
Ring hydroxylating alpha subunit (catalytic domain).
  
  
 0.538
SDC22675.1
Phthalate 3,4-dioxygenase beta subunit.
     
 0.523
SDC68447.1
DNA-binding transcriptional activator of the SARP family.
  
 0.514
SDD54212.1
Predicted ATPase.
  
 0.514
SDD75484.1
DNA-binding transcriptional activator of the SARP family.
  
 0.514
SDC73736.1
Predicted dehydrogenase.
  
 
 0.506
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.