STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC49286.1Mce-associated membrane protein. (169 aa)    
Predicted Functional Partners:
SDC49317.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
  
 0.950
SDC49253.1
Mce-associated membrane protein.
 
     0.947
SDC49444.1
Virulence factor Mce family protein.
 
  
 0.936
SDC49389.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
  
 0.930
SDC49366.1
Virulence factor Mce family protein.
 
  
 0.917
SDC49414.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
  
 0.916
SDC49335.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
  
 0.906
SDC49467.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
  
 0.870
SDC49492.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
  
 0.860
SDD39589.1
Acyl transferase domain-containing protein.
  
 0.814
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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