STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC66976.1Hypothetical protein. (503 aa)    
Predicted Functional Partners:
SDC67003.1
4-amino-4-deoxy-L-arabinose transferase.
 
     0.864
SDC90367.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.785
SDD34162.1
Hypothetical protein.
  
     0.763
SDD19951.1
Hypothetical protein.
  
     0.734
SDC66950.1
Arabinosyltransferase C.
 
   
 0.732
SDD49869.1
Hypothetical protein.
  
     0.719
SDC18937.1
4-hydroxybenzoate polyprenyltransferase.
 
  
 0.684
SDC68494.1
Protein of unknown function.
  
     0.645
SDE04410.1
Hypothetical protein.
  
     0.640
SDC21770.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.610
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.